OCPAT : Online Codon-Preserved Alignment Tools (Liu, Islam, Uddin and Wildman)

your e-mail
( = required, = conditionally required)

A list of RefSeq IDs (in one column) : please enter either :

1. the name of a file:
2. or the actual data here:

Add Pan troglodytes (Chimpanzee) genes to the alignment?
Add Macaca mulatta (Rhesus Monkey) genes to the alignment?
Add Mus musculus (Mouse) genes to the alignment?
Add Rattus norvegicus (Rat) genes to the alignment?
Add Oryctolagus cuniculus (Rabbit) genes to the alignment?
Add Canis familiaris (Dog) genes to the alignment?
Add Bos taurus (Cow) genes to the alignment?
Add Dasypus novemcinctus (Armadillo) genes to the alignment?
Add Loxodonta africana (Elephant) genes to the alignment?
Add Echinops telfairi (Tenrec) genes to the alignment?
Add Monodelphis domestica (Opossum) genes to the alignment?
Add Gallus gallus (Chicken) genes to the alignment?
Add Xenopus tropicalis (Frog) genes to the alignment?
Add Ornithorhynchus anatinus (Platypus) genes to the alignment?

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your e-mail

Some explanations about the options

Main parameters

enter either the name of a file or the actual data

if you are using Netscape 2.x or later, you can select a file by typing its name, or better, by selecting it with the Netscape file browser (Browse button)

OR you can type your data in the next area, or cut and paste it from another application.

(but not both)

The input for the OCPAT is very simple, it is the human RefSeq gene IDs for the genes that are waiting to be analyzed. The human RefSeq gene IDs

have a format "NM_xxxxxx" or "XM_xxxxx". "x" is a digital number (0-9) and the length of the digitals are variable.

- Example Input File: RefSeq_IDs.data

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